Source Code for Package Bio.Align.Applications

 1  # Copyright 2009 by Peter Cock & Cymon J. Cox.  All rights reserved. 
 2  # This code is part of the Biopython distribution and governed by its 
 3  # license.  Please see the LICENSE file that should have been included 
 4  # as part of this package. 
 5  """Alignment command line tool wrappers.""" 
 6   
 7  __docformat__ = "epytext en"  # Don't just use plain text in epydoc API pages! 
 8   
 9  from _Muscle import MuscleCommandline 
10  from _Clustalw import ClustalwCommandline 
11  from _ClustalOmega import ClustalOmegaCommandline 
12  from _Prank import PrankCommandline 
13  from _Mafft import MafftCommandline 
14  from _Dialign import DialignCommandline 
15  from _Probcons import ProbconsCommandline 
16  from _TCoffee import TCoffeeCommandline 
17   
18  #Make this explicit, then they show up in the API docs 
19  __all__ = ["MuscleCommandline", 
20             "ClustalwCommandline", 
21             "ClustalOmegaCommandline", 
22             "PrankCommandline", 
23             "MafftCommandline", 
24             "DialignCommandline", 
25             "ProbconsCommandline", 
26             "TCoffeeCommandline", 
27             ] 
28