Package Bio :: Package Blast :: Module Applications :: Class _NcbibaseblastCommandline
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Class _NcbibaseblastCommandline

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                     object --+    
                              |    
Application.AbstractCommandline --+
                                  |
                                 _NcbibaseblastCommandline
Known Subclasses:

Base Commandline object for (new) NCBI BLAST+ wrappers (PRIVATE).

This is provided for subclassing, it deals with shared options
common to all the BLAST tools (blastn, rpsblast, rpsblast, etc
AND blast_formatter).

Instance Methods [hide private]
 
__init__(self, cmd=None, **kwargs)
Create a new instance of a command line wrapper object.
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_validate_incompatibilities(self, incompatibles)
Used by the BLAST+ _validate method (PRIVATE).
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Inherited from Application.AbstractCommandline: __call__, __repr__, __setattr__, __str__, set_parameter

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __sizeof__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, cmd=None, **kwargs)
(Constructor)

source code 
Create a new instance of a command line wrapper object.

Overrides: object.__init__
(inherited documentation)