Package Bio :: Package Emboss :: Module Applications :: Class _EmbossMinimalCommandLine
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Class _EmbossMinimalCommandLine

source code

                     object --+    
Application.AbstractCommandline --+
Known Subclasses:

Base Commandline object for EMBOSS wrappers (PRIVATE).

This is provided for subclassing, it deals with shared options
common to all the EMBOSS tools:

 - auto               Turn off prompts
 - stdout             Write standard output
 - filter             Read standard input, write standard output
 - options            Prompt for standard and additional values
 - debug              Write debug output to program.dbg
 - verbose            Report some/full command line options
 - help               Report command line options. More
                      information on associated and general
                      qualifiers can be found with -help -verbose
 - warning            Report warnings
 - error              Report errors
 - fatal              Report fatal errors
 - die                Report dying program messages

Instance Methods [hide private]
__init__(self, cmd=None, **kwargs)
Create a new instance of a command line wrapper object.
source code

Inherited from Application.AbstractCommandline: __call__, __repr__, __setattr__, __str__, set_parameter

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __sizeof__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, cmd=None, **kwargs)

source code 
Create a new instance of a command line wrapper object.

Overrides: object.__init__
(inherited documentation)