Package Bio :: Package ExPASy :: Module ScanProsite
[hide private]
[frames] | no frames]

Module ScanProsite

source code

Classes [hide private]
Represents search results returned by ScanProsite.
Functions [hide private]
scan(seq='', mirror='', output='xml', **keywords)
Execute a ScanProsite search.
source code
Parse search results returned by ScanProsite into a Python object
source code
Variables [hide private]
  __package__ = 'Bio.ExPASy'
Function Details [hide private]

scan(seq='', mirror='', output='xml', **keywords)

source code 

Execute a ScanProsite search.

  • mirror: The ScanProsite mirror to be used


  • seq: The query sequence, or UniProtKB (Swiss-Prot,

    TrEMBL) accession

  • output: Format of the search results

    (default: xml)

Further search parameters can be passed as keywords; see the documentation for programmatic access to ScanProsite at for a description of such parameters.

This function returns a handle to the search results returned by ScanProsite. Search results in the XML format can be parsed into a Python object, by using the function.