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object --+
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GenericTools.Surrogate --+
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object --+ |
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SeqRecord.SeqRecord --+
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RetrieveSeqname
Singleton: contain records of loaded FASTA files
>>> RetrieveSeqname._dir = 'GFF'
>>> RetrieveSeqname._diagnostics = 1
>>> sys.stderr = sys.stdout # dump diagnostics to stdout so doctest can see them
>>> record1 = RetrieveSeqname('NC_001802.fna')
Loading GFF/NC_001802.fna... Done.
>>> record1.id
'gi|9629357|ref|NC_001802.1|'
>>> record2 = RetrieveSeqname('NC_001802.fna')
>>> record1.seq is record2.seq # should be same space in memory
1
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Inherited from Inherited from Inherited from Inherited from |
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__records =
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_diagnostics = 0
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Inherited from Inherited from |
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x.__init__(...) initializes x; see x.__class__.__doc__ for signature
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| Generated by Epydoc 3.0.1 on Wed Sep 1 11:38:12 2010 | http://epydoc.sourceforge.net |