Package Bio :: Package Nexus :: Module Nexus :: Class StepMatrix
[hide private]
[frames] | no frames]

Class StepMatrix

source code

object --+
         |
        StepMatrix

Calculate a stepmatrix for weighted parsimony.

See Wheeler (1990), Cladistics 6:269-275.

Instance Methods [hide private]
 
__init__(self, symbols, gap)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature
source code
 
set(self, x, y, value) source code
 
add(self, x, y, value) source code
 
sum(self) source code
 
transformation(self) source code
 
weighting(self) source code
 
smprint(self, name='your_name_here') source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, symbols, gap)
(Constructor)

source code 
x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Overrides: object.__init__
(inherited documentation)