Package Bio :: Package Phylo :: Module NewickIO :: Class Writer
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Class Writer

source code

object --+
         |
        Writer

Based on the writer in Bio.Nexus.Trees (str, to_string).
Instance Methods [hide private]
 
__init__(self, trees)
x.__init__(...) initializes x; see help(type(x)) for signature
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write(self, handle, **kwargs)
Write this instance's trees to a file handle.
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to_strings(self, confidence_as_branch_length=False, branch_length_only=False, plain=False, plain_newick=True, ladderize=None, max_confidence=1.0, format_confidence='%1.2f', format_branch_length='%1.5f')
Return an iterable of PAUP-compatible tree lines.
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_info_factory(self, plain, confidence_as_branch_length, branch_length_only, max_confidence, format_confidence, format_branch_length)
Return a function that creates a nicely formatted node tag.
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Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, trees)
(Constructor)

source code 
x.__init__(...) initializes x; see help(type(x)) for signature

Overrides: object.__init__
(inherited documentation)