Package Bio :: Package SCOP :: Module Cla
[hide private]
[frames] | no frames]

Module Cla

source code

Handle the SCOP CLAssification file, which describes SCOP domains.

The file format is described in the scop
"release notes.":http://scop.mrc-lmb.cam.ac.uk/scop/release-notes.html
The latest CLA file can be found
"elsewhere at SCOP.":http://scop.mrc-lmb.cam.ac.uk/scop/parse/

"Release 1.73": http://scop.mrc-lmb.cam.ac.uk/scop/parse/dir.cla.scop.txt_1.73
(July 2008)

Classes [hide private]
  Record
Holds information for one SCOP domain.
  Index
A CLA file indexed by SCOP identifiers for rapid random access.
Functions [hide private]
 
parse(handle)
Iterates over a CLA file as Cla records for each line.
source code
Variables [hide private]
  __package__ = 'Bio.SCOP'
Function Details [hide private]

parse(handle)

source code 
Iterates over a CLA file as Cla records for each line.

Arguments:

 - handle - file-like object.