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__init__(self,
handle,
comments=False,
fields=['qseqid', 'sseqid', 'pident', 'length', 'mismatch', 'gapopen'...)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature |
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write_file(self,
qresults)
Writes to the handle, returns how many QueryResult objects are written. |
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_build_rows(self,
qresult)
Returns a string containing tabular rows of the QueryResult object. |
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_adjust_coords(self,
field,
value,
hsp)
Adjusts start and end coordinates according to strand. |
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_adjust_output(self,
field,
value)
Adjusts formatting of the given field and value to mimic native tab output. |
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_build_comments(self,
qres)
Returns a string of a QueryResult tabular comment. |
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Inherited from object:
__delattr__,
__getattribute__,
__hash__,
__new__,
__reduce__,
__reduce_ex__,
__repr__,
__setattr__,
__str__
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