Package Bio :: Package SearchIO :: Module BlatIO :: Class BlatPslParser
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Class BlatPslParser

source code

object --+
         |
        BlatPslParser

Parser for the BLAT PSL format.

Instance Methods [hide private]
 
__init__(self, handle, pslx=False)
x.__init__(...) initializes x; see help(type(x)) for signature
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__iter__(self) source code
 
_parse_row(self)
Returns a dictionary of parsed column values.
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_validate_cols(self, cols) source code
 
_parse_qresult(self)
Generator function that returns QueryResult objects.
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Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, handle, pslx=False)
(Constructor)

source code 
x.__init__(...) initializes x; see help(type(x)) for signature

Overrides: object.__init__
(inherited documentation)