Package Bio :: Package Wise :: Module dnal :: Class Statistics
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Class Statistics

source code

object --+
         |
        Statistics


Calculate statistics from an ALB report

Instance Methods [hide private]
 
__init__(self, filename, match, mismatch, gap, extension)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature
source code
 
identity_fraction(self) source code
 
__str__(self)
str(x)
source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __subclasshook__

Class Variables [hide private]
  header = 'identity_fraction\tmatches\tmismatches\tgaps\textens...
Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, filename, match, mismatch, gap, extension)
(Constructor)

source code 
x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Overrides: object.__init__
(inherited documentation)

__str__(self)
(Informal representation operator)

source code 
str(x)

Overrides: object.__str__
(inherited documentation)

Class Variable Details [hide private]

header

Value:
'identity_fraction\tmatches\tmismatches\tgaps\textensions'