Package Bio :: Module pairwise2 :: Class identity_match
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Class identity_match

source code

object --+
         |
        identity_match

identity_match([match][, mismatch]) -> match_fn

Create a match function for use in an alignment. match and mismatch are the scores to give when two residues are equal or unequal. By default, match is 1 and mismatch is 0.

Instance Methods [hide private]
 
__init__(self, match=1, mismatch=0)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature
source code
 
__call__(self, charA, charB) source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, match=1, mismatch=0)
(Constructor)

source code 
x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Overrides: object.__init__
(inherited documentation)