Table of Contents


Everything

Modules

Bio
Bio.Affy
Bio.Affy.CelFile
Bio.Align
Bio.Align.AlignInfo
Bio.Align.Applications
Bio.Align.Applications._ClustalOmega
Bio.Align.Applications._Clustalw
Bio.Align.Applications._Dialign
Bio.Align.Applications._MSAProbs
Bio.Align.Applications._Mafft
Bio.Align.Applications._Muscle
Bio.Align.Applications._Prank
Bio.Align.Applications._Probcons
Bio.Align.Applications._TCoffee
Bio.Align.Generic
Bio.AlignIO
Bio.AlignIO.ClustalIO
Bio.AlignIO.EmbossIO
Bio.AlignIO.FastaIO
Bio.AlignIO.Interfaces
Bio.AlignIO.NexusIO
Bio.AlignIO.PhylipIO
Bio.AlignIO.StockholmIO
Bio.Alphabet
Bio.Alphabet.IUPAC
Bio.Alphabet.Reduced
Bio.Application
Bio.Blast
Bio.Blast.Applications
Bio.Blast.NCBIStandalone
Bio.Blast.NCBIWWW
Bio.Blast.NCBIXML
Bio.Blast.ParseBlastTable
Bio.Blast.Record
Bio.CAPS
Bio.Cluster
Bio.Compass
Bio.Crystal
Bio.Data
Bio.Data.CodonTable
Bio.Data.IUPACData
Bio.Data.SCOPData
Bio.DocSQL
Bio.Emboss
Bio.Emboss.Applications
Bio.Emboss.Primer3
Bio.Emboss.PrimerSearch
Bio.Entrez
Bio.Entrez.Parser
Bio.ExPASy
Bio.ExPASy.Enzyme
Bio.ExPASy.Prodoc
Bio.ExPASy.Prosite
Bio.ExPASy.ScanProsite
Bio.FSSP
Bio.FSSP.FSSPTools
Bio.FSSP.fssp_rec
Bio.File
Bio.GA
Bio.GA.Crossover
Bio.GA.Crossover.General
Bio.GA.Crossover.GeneralPoint
Bio.GA.Crossover.Point
Bio.GA.Crossover.TwoPoint
Bio.GA.Crossover.Uniform
Bio.GA.Evolver
Bio.GA.Mutation
Bio.GA.Mutation.General
Bio.GA.Mutation.Simple
Bio.GA.Organism
Bio.GA.Repair
Bio.GA.Repair.Stabilizing
Bio.GA.Selection
Bio.GA.Selection.Abstract
Bio.GA.Selection.Diversity
Bio.GA.Selection.RouletteWheel
Bio.GA.Selection.Tournament
Bio.GenBank
Bio.GenBank.Record
Bio.GenBank.Scanner
Bio.GenBank.utils
Bio.Geo
Bio.Geo.Record
Bio.Graphics
Bio.Graphics.BasicChromosome
Bio.Graphics.ColorSpiral
Bio.Graphics.Comparative
Bio.Graphics.DisplayRepresentation
Bio.Graphics.Distribution
Bio.Graphics.GenomeDiagram
Bio.Graphics.GenomeDiagram._AbstractDrawer
Bio.Graphics.GenomeDiagram._CircularDrawer
Bio.Graphics.GenomeDiagram._Colors
Bio.Graphics.GenomeDiagram._CrossLink
Bio.Graphics.GenomeDiagram._Diagram
Bio.Graphics.GenomeDiagram._Feature
Bio.Graphics.GenomeDiagram._FeatureSet
Bio.Graphics.GenomeDiagram._Graph
Bio.Graphics.GenomeDiagram._GraphSet
Bio.Graphics.GenomeDiagram._LinearDrawer
Bio.Graphics.GenomeDiagram._Track
Bio.HMM
Bio.HMM.DynamicProgramming
Bio.HMM.MarkovModel
Bio.HMM.Trainer
Bio.HMM.Utilities
Bio.HotRand
Bio.Index
Bio.KDTree
Bio.KDTree.KDTree
Bio.KEGG
Bio.KEGG.Compound
Bio.KEGG.Enzyme
Bio.KEGG.Map
Bio.LogisticRegression
Bio.MarkovModel
Bio.MaxEntropy
Bio.Medline
Bio.Motif
Bio.Motif.Applications
Bio.Motif.Parsers
Bio.Motif.Parsers.AlignAce
Bio.Motif.Parsers.MAST
Bio.Motif.Parsers.MEME
Bio.Motif.Thresholds
Bio.Motif._Motif
Bio.NMR
Bio.NMR.NOEtools
Bio.NMR.xpktools
Bio.NaiveBayes
Bio.NeuralNetwork
Bio.NeuralNetwork.BackPropagation
Bio.NeuralNetwork.BackPropagation.Layer
Bio.NeuralNetwork.BackPropagation.Network
Bio.NeuralNetwork.Gene
Bio.NeuralNetwork.Gene.Motif
Bio.NeuralNetwork.Gene.Pattern
Bio.NeuralNetwork.Gene.Schema
Bio.NeuralNetwork.Gene.Signature
Bio.NeuralNetwork.StopTraining
Bio.NeuralNetwork.Training
Bio.Nexus
Bio.Nexus.Nexus
Bio.Nexus.Nodes
Bio.Nexus.Trees
Bio.PDB
Bio.PDB.AbstractPropertyMap
Bio.PDB.Atom
Bio.PDB.Chain
Bio.PDB.DSSP'
Bio.PDB.Dice
Bio.PDB.Entity
Bio.PDB.FragmentMapper'
Bio.PDB.HSExposure
Bio.PDB.MMCIF2Dict
Bio.PDB.MMCIFParser'
Bio.PDB.Model
Bio.PDB.NACCESS
Bio.PDB.NeighborSearch
Bio.PDB.PDBExceptions
Bio.PDB.PDBIO'
Bio.PDB.PDBList'
Bio.PDB.PDBParser'
Bio.PDB.PSEA
Bio.PDB.Polypeptide
Bio.PDB.Residue
Bio.PDB.ResidueDepth'
Bio.PDB.Selection
Bio.PDB.Structure
Bio.PDB.StructureAlignment'
Bio.PDB.StructureBuilder
Bio.PDB.Superimposer'
Bio.PDB.Vector'
Bio.PDB.mmCIF
Bio.PDB.parse_pdb_header'
Bio.ParserSupport
Bio.Pathway
Bio.Pathway.Rep
Bio.Pathway.Rep.Graph
Bio.Pathway.Rep.MultiGraph
Bio.Phylo
Bio.Phylo.Applications
Bio.Phylo.Applications._Fasttree
Bio.Phylo.Applications._Phyml
Bio.Phylo.Applications._Raxml
Bio.Phylo.BaseTree
Bio.Phylo.CDAO
Bio.Phylo.CDAOIO
Bio.Phylo.NeXML
Bio.Phylo.NeXMLIO
Bio.Phylo.Newick
Bio.Phylo.NewickIO
Bio.Phylo.NexusIO
Bio.Phylo.PAML
Bio.Phylo.PAML._paml
Bio.Phylo.PAML._parse_baseml
Bio.Phylo.PAML._parse_codeml
Bio.Phylo.PAML._parse_yn00
Bio.Phylo.PAML.baseml
Bio.Phylo.PAML.chi2
Bio.Phylo.PAML.codeml
Bio.Phylo.PAML.yn00
Bio.Phylo.PhyloXML
Bio.Phylo.PhyloXMLIO
Bio.Phylo._cdao_owl
Bio.Phylo._io
Bio.Phylo._utils
Bio.PopGen
Bio.PopGen.Async
Bio.PopGen.Async.Local
Bio.PopGen.FDist
Bio.PopGen.FDist.Async
Bio.PopGen.FDist.Controller
Bio.PopGen.FDist.Utils
Bio.PopGen.GenePop
Bio.PopGen.GenePop.Controller
Bio.PopGen.GenePop.EasyController
Bio.PopGen.GenePop.FileParser
Bio.PopGen.GenePop.LargeFileParser
Bio.PopGen.GenePop.Utils
Bio.PopGen.SimCoal
Bio.PopGen.SimCoal.Async
Bio.PopGen.SimCoal.Cache
Bio.PopGen.SimCoal.Controller
Bio.PopGen.SimCoal.Template
Bio.Restriction
Bio.Restriction.PrintFormat
Bio.Restriction.RanaConfig
Bio.Restriction.Restriction
Bio.Restriction.Restriction_Dictionary
Bio.SCOP
Bio.SCOP.Cla
Bio.SCOP.Des
Bio.SCOP.Dom
Bio.SCOP.Hie
Bio.SCOP.Raf
Bio.SCOP.Residues
Bio.SCOP.three_to_one_dict
Bio.SVDSuperimposer
Bio.Search
Bio.SearchIO
Bio.SearchIO.BlastIO
Bio.SearchIO.BlastIO.blast_tab
Bio.SearchIO.BlastIO.blast_text
Bio.SearchIO.BlastIO.blast_xml
Bio.SearchIO.BlatIO
Bio.SearchIO.ExonerateIO
Bio.SearchIO.ExonerateIO._base
Bio.SearchIO.ExonerateIO.exonerate_cigar
Bio.SearchIO.ExonerateIO.exonerate_text
Bio.SearchIO.ExonerateIO.exonerate_vulgar
Bio.SearchIO.FastaIO
Bio.SearchIO.HmmerIO
Bio.SearchIO.HmmerIO._base
Bio.SearchIO.HmmerIO.hmmer2_text
Bio.SearchIO.HmmerIO.hmmer3_domtab
Bio.SearchIO.HmmerIO.hmmer3_tab
Bio.SearchIO.HmmerIO.hmmer3_text
Bio.SearchIO._index
Bio.SearchIO._model
Bio.SearchIO._model._base
Bio.SearchIO._model.hit
Bio.SearchIO._model.hsp
Bio.SearchIO._model.query
Bio.SearchIO._utils
Bio.Seq
Bio.SeqFeature
Bio.SeqIO
Bio.SeqIO.AbiIO
Bio.SeqIO.AceIO
Bio.SeqIO.FastaIO
Bio.SeqIO.IgIO
Bio.SeqIO.InsdcIO
Bio.SeqIO.Interfaces
Bio.SeqIO.PdbIO
Bio.SeqIO.PhdIO
Bio.SeqIO.PirIO
Bio.SeqIO.QualityIO
Bio.SeqIO.SeqXmlIO
Bio.SeqIO.SffIO
Bio.SeqIO.SwissIO
Bio.SeqIO.TabIO
Bio.SeqIO.UniprotIO
Bio.SeqIO._convert
Bio.SeqIO._index
Bio.SeqRecord
Bio.SeqUtils
Bio.SeqUtils.CheckSum
Bio.SeqUtils.CodonUsage
Bio.SeqUtils.CodonUsageIndices
Bio.SeqUtils.IsoelectricPoint
Bio.SeqUtils.MeltingTemp
Bio.SeqUtils.ProtParam
Bio.SeqUtils.ProtParamData
Bio.SeqUtils.lcc
Bio.Sequencing
Bio.Sequencing.Ace
Bio.Sequencing.Applications
Bio.Sequencing.Applications._Novoalign
Bio.Sequencing.Applications._bwa
Bio.Sequencing.Phd
Bio.Statistics
Bio.Statistics.lowess
Bio.SubsMat
Bio.SubsMat.FreqTable
Bio.SubsMat.MatrixInfo
Bio.SwissProt
Bio.SwissProt.KeyWList
Bio.TogoWS
Bio.UniGene
Bio.UniGene.UniGene
Bio.UniProt
Bio.UniProt.GOA
Bio.Wise
Bio.Wise.dnal
Bio.Wise.psw
Bio._py3k
Bio._py3k._ordereddict
Bio._utils
Bio.bgzf
Bio.kNN
Bio.motifs
Bio.motifs.alignace
Bio.motifs.applications
Bio.motifs.applications._alignace
Bio.motifs.applications._xxmotif
Bio.motifs.jaspar
Bio.motifs.jaspar.db
Bio.motifs.mast
Bio.motifs.matrix
Bio.motifs.meme
Bio.motifs.thresholds
Bio.motifs.transfac
Bio.pairwise2
Bio.triefind
BioSQL
BioSQL.BioSeq
BioSQL.BioSeqDatabase
BioSQL.DBUtils
BioSQL.Loader

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