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Contents

Current Release -- 1.43 -- 17 March 2007

Installation Instructions

Files

Required Software

For Ubuntu Linux, install the following packages to cover these requirements:

  • python-egenix-mxtexttools
  • python-numeric
  • python-dev
  • build-essential

Optional Software

Biopython-corba

Files

Required Software

Packages

Ubuntu

Biopython 1.41 packages for Ubuntu (Dapper):

Ubuntu Edgy doesn't seem to have working AMD64 packages. Fiesty biopython 1.42 AMD64 packages backported for Edgy here:

Fedora

Fedora Core 5, Fedora Core 6 and rawhide (soon-to-be Fedora 7) have official packages for biopython 1.43 called python-biopython, it can be installed using yum:

yum install python-biopython

Ports

FreeBSD

The most easy way of installing BioPython in FreeBSD is through the Ports Collection. If you're new to this procedure please take a look at this document. Supposing that you're familiar with this method and that you have an up-to-date ports tree, all you need to do is to execute the following commands as root:

# cd /usr/ports/biology/py-biopython
# make install clean

Due to the great architecture of the ports system, this simple commands will automatically fetch and install BioPython (as well as its necessary dependencies).

Old Releases

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