List of applications executed via Biopython

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(Python libraries: added reportlab; noted where libraries are used)
(Python libraries: added pygraphviz/pydot; looks like matplotlib is Phylo-specific, too)
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NumPy
 
NumPy
 
Matplotib
 
  
 
Reportlab (Bio.Graphics only)
 
Reportlab (Bio.Graphics only)
 +
 +
Matplotlib (Bio.Phylo.draw and draw_graphviz only)
  
 
RDFLib (Bio.Phylo.CDAOIO only)
 
RDFLib (Bio.Phylo.CDAOIO only)
  
 
NetworkX (Bio.Phylo.to_networkx and draw_graphviz only)
 
NetworkX (Bio.Phylo.to_networkx and draw_graphviz only)
 +
 +
PyGraphviz or Pydot (Bio.Phylo.draw_graphviz only)
  
 
===Applications===
 
===Applications===

Revision as of 18:42, 8 December 2013

(under construction)

Python libraries

NumPy

Reportlab (Bio.Graphics only)

Matplotlib (Bio.Phylo.draw and draw_graphviz only)

RDFLib (Bio.Phylo.CDAOIO only)

NetworkX (Bio.Phylo.to_networkx and draw_graphviz only)

PyGraphviz or Pydot (Bio.Phylo.draw_graphviz only)

Applications

Bio.Phylo:

Bio.PDB:

I am not particularly fond of the title of this page (tiago), if you have a better one, please correct

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